API Investigation:Sparql

Description	Get information from investigations
Resource	Investigation
Method	GET
URI	investigation/sparql/{template_name}
Parameters	params per template(template_name): no params needed for investigation_and_characteristics, investigations_and_factors and investigations_and_protocols factorValues: URI array for investigation_by_factors and protocols_by_factors template geneIdentifiers: Array of Strings for investigation_by_genes (e.G.: uniprot:P10809,genesymbol:HSPD1,unigene:Hs.595053,refseq:NM_002156,entrez:3329) value: String for investigation_by_characteristic_name, investigation_by_characteristic_value, investigation_by_characteristic and investigation_by_factor relOperator: String for investigation_by_gene_and_value. Relational operator for pvalue, qvalue, FC. One of <below, above>.
Header Parameters	Accept: application/json, subjectid:SECURITY-TOKEN
Media Type (input)
Results	Investigation data as json
Media Type (output)	application/json
Status code	200, 400, 401, 404

Get information from published investigations via predefined SPARQL queries. (e.G.: https://services.toxbank.net/investigation/sparql/investigations_and_protocols ) . You may also use camelcase notation for templatenames (e.G.: InvestigationsAndProtocols, InvestigationByFactors).

cURL example

curl -X GET -k -H 'Accept:application/json' -H 'subjectid:MYTOKEN' https://services.toxbank.net/investigation/sparql/genelist

curl -X GET -k -H "Accept:application/json" -H "subjectid:MYTOKEN" https://services.toxbank.net/investigation/sparql/investigation_and_characteristics

curl -X GET -k -H "Accept:application/json" -H "subjectid:MYTOKEN" -d "value=http://purl.obolibrary.org/obo/NEWT_4932" https://services.toxbank.net/investigation/sparql/investigation_by_characteristic

curl -X GET -k -H "Accept:application/json" -H "subjectid:MYTOKEN" -d "value=organism" https://services.toxbank.net/investigation/sparql/investigation_by_characteristic_name

curl -X GET -k -H "Accept:application/json" -H "subjectid:MYTOKEN" -d "value=Saccharomyces cerevisiae (Baker's yeast)" https://services.toxbank.net/investigation/sparql/investigation_by_characteristic_value

curl -X GET -k -H "Accept:application/json" -H "subjectid:MYTOKEN" -d "values=http://purl.obolibrary.org/chebi/CHEBI:39867" https://services.toxbank.net/investigation/sparql/investigation_by_factor

curl -X GET -k -H "Accept:application/json" -H "subjectid:MYTOKEN" -d "factorValues=['http://purl.obolibrary.org/chebi/CHEBI:39867']" https://services.toxbank.net/investigation/sparql/investigation_by_factors

curl -X GET -k -H "Accept:application/json" -H "subjectid:MYTOKEN" -d "value=0.035" https://services.toxbank.net/investigation/sparql/investigation_by_foldchange

curl -X GET -k -H "Accept:application/json" -H "subjectid:MYTOKEN" -d "geneIdentifiers=['uniprot:P10809','genesymbol:HSPD1','unigene:Hs.595053']" https://services.toxbank.net/investigation/sparql/investigation_by_genes

curl -X GET -k -H "Accept:application/json" -H "subjectid:MYTOKEN" -d "geneIdentifiers=['uniprot:P10809','genesymbol:HSPD1','unigene:Hs.595053']" -d "value=pvalue:0.65614" https://services.toxbank.net/investigation/sparql/investigation_by_gene_and_value

curl -X GET -k -H "Accept:application/json" -H "subjectid:MYTOKEN" -d "geneIdentifiers=['uniprot:P10809','genesymbol:HSPD1','unigene:Hs.595053']" -d "value=pvalue:0.65614" -d "relOperator=above" https://services.toxbank.net/investigation/sparql/investigation_by_gene_and_value

curl -X GET -k -H "Accept:application/json" -H "subjectid:MYTOKEN" -d "value=FC:0.65614" https://services.toxbank.net/investigation/sparql/investigation_by_value

curl -X GET -k -H "Accept:application/json" -H "subjectid:MYTOKEN" -d "value=qvalue:0.805517" https://services.toxbank.net/investigation/sparql/investigation_by_value

curl -X GET -k -H 'Accept:application/json' -H 'subjectid:MYTOKEN' https://services.toxbank.net/investigation/sparql/investigations_and_factors

curl -X GET -k -H 'Accept:application/json' -H 'subjectid:MYTOKEN' https://services.toxbank.net/investigation/sparql/investigations_and_protocols

curl -X GET -k -H 'Accept:application/json' -H 'subjectid:MYTOKEN' -d "factorValues=['http://purl.obolibrary.org/chebi/CHEBI:39867']" https://services.toxbank.net/investigation/sparql/protocols_by_factors