API Investigation:Sparql
From ToxBank API Wiki
(Difference between revisions)
Line 5: | Line 5: | ||
|REST_op_uri=investigation/sparql/{template_name} | |REST_op_uri=investigation/sparql/{template_name} | ||
|REST_op_params=params per template(template_name): | |REST_op_params=params per template(template_name): | ||
− | * no params needed for investigation_and_characteristics, investigations_and_factors and | + | * no params needed for investigation_and_characteristics, investigations_and_factors and investigations_and_protocols |
* factorValues: URI array for investigation_by_factors and protocols_by_factors template | * factorValues: URI array for investigation_by_factors and protocols_by_factors template | ||
* geneIdentifiers: Array of Strings for investigation_by_genes (e.G.: uniprot:P10809,genesymbol:HSPD1,unigene:Hs.595053,refseq:NM_002156,entrez:3329) | * geneIdentifiers: Array of Strings for investigation_by_genes (e.G.: uniprot:P10809,genesymbol:HSPD1,unigene:Hs.595053,refseq:NM_002156,entrez:3329) |
Revision as of 09:16, 13 January 2014
Description | Get information from investigations |
---|---|
Resource | Investigation |
Method | GET |
URI | investigation/sparql/{template_name} |
Parameters | params per template(template_name):
|
Header Parameters | Accept: one of < application/sparql-results+xml, application/json, text/uri-list, text/html > , subjectid:SECURITY-TOKEN |
Media Type (input) | |
Results | Investigation data as sparql-results+xml json uri-list html |
Media Type (output) | application/sparql-results+xml application/json text/uri-list text/html |
Status code | 200 |
Get information from published investigations via predefined SPARQL queries. (e.G.: https://services.toxbank.net/investigation/sparql/investigation_and_protocols ) . You may also use camelcase notation for templatenames (e.G.: InvestigationAndProtocols, InvestigationByFactors).
cURL example
curl -X GET -k -H "Accept:application/json" -H "subjectid:MYTOKEN" https://services.toxbank.net/investigation/sparql/investigation_and_characteristics
curl -X GET -k -H "Accept:application/json" -H "subjectid:MYTOKEN" -d "value=http://purl.obolibrary.org/obo/NEWT_4932" https://services.toxbank.net/investigation/sparql/investigation_by_characteristic
curl -X GET -k -H "Accept:application/json" -H "subjectid:MYTOKEN" -d "value=organism" https://services.toxbank.net/investigation/sparql/investigation_by_characteristic_name
curl -X GET -k -H "Accept:application/json" -H "subjectid:MYTOKEN" -d "value=Saccharomyces cerevisiae (Baker's yeast)" https://services.toxbank.net/investigation/sparql/investigation_by_characteristic_value
curl -X GET -k -H "Accept:application/json" -H "subjectid:MYTOKEN" -d "factorValues=['http://purl.obolibrary.org/chebi/CHEBI:39867']" https://services.toxbank.net/investigation/sparql/investigation_by_factor
curl -X GET -k -H "Accept:application/json" -H "subjectid:MYTOKEN" -d "factorValues=['http://purl.obolibrary.org/chebi/CHEBI:39867']" https://services.toxbank.net/investigation/sparql/investigation_by_factors
curl -X GET -k -H "Accept:application/json" -H "subjectid:MYTOKEN" -d "value=0.035" https://services.toxbank.net/investigation/sparql/investigation_by_foldchange
curl -X GET -k -H "Accept:application/json" -H "subjectid:MYTOKEN" -d "geneIdentifiers=['uniprot:P10809','genesymbol:HSPD1','unigene:Hs.595053']" https://services.toxbank.net/investigation/sparql/investigation_by_genes
curl -X GET -k -H "Accept:application/json" -H "subjectid:MYTOKEN" -d "value=0.65614" https://services.toxbank.net/investigation/sparql/investigation_by_pvalue
curl -X GET -k -H "Accept:application/json" -H "subjectid:MYTOKEN" -d "value=0.805517" https://services.toxbank.net/investigation/sparql/investigation_by_qvalue
curl -X GET -k -H 'Accept:application/json' -H 'subjectid:MYTOKEN' https://services.toxbank.net/investigation/sparql/investigations_and_factors
curl -X GET -k -H 'Accept:application/json' -H 'subjectid:MYTOKEN' https://services.toxbank.net/investigation/sparql/investigations_and_protocols
curl -X GET -k -H 'Accept:application/json' -H 'subjectid:MYTOKEN' -d "factorValues=['http://purl.obolibrary.org/chebi/CHEBI:39867']" https://services.toxbank.net/investigation/sparql/protocols_by_factors
Facts about API Investigation:SparqlRDF feed
Acts on | Investigation + |
Has output media type | application/sparql-results+xml application/json text/uri-list text/html + |
Has status code | 200 + |