API Investigation:Sparql
From ToxBank API Wiki
Description | Get information from investigations |
---|---|
Resource | Investigation |
Method | GET |
URI | investigation/sparql/{template_name} |
Parameters | params per template(template_name):* no params needed for investigation_and_characteristics, investigations_and_factors and investigations_and_protocols* factorValues: URI array for investigation_by_factors and protocols_by_factors template * geneIdentifiers: Array of Strings for investigation_by_genes (e.G.: uniprot:P10809,genesymbol:HSPD1,unigene:Hs.595053,refseq:NM_002156,entrez:3329)* value: String for investigation_by_characteristic_name, investigation_by_characteristic_value, investigation_by_characteristic and investigation_by_factor* relOperator: String for investigation_by_gene_and_value. Relational operator for pvalue, qvalue, FC. One of <below, above>. |
Header Parameters | Accept: application/json, subjectid:SECURITY-TOKEN |
Media Type (input) | |
Results | Investigation data as json |
Media Type (output) | application/json |
Status code | 200, 400, 401, 404 |
Get information from published investigations via predefined SPARQL queries. (e.G.: https://services.toxbank.net/investigation/sparql/investigations_and_protocols ) . You may also use camelcase notation for templatenames (e.G.: InvestigationsAndProtocols, InvestigationByFactors).
cURL example
curl -X GET -k -H 'Accept:application/json' -H 'subjectid:MYTOKEN' https://services.toxbank.net/investigation/sparql/genelist
curl -X GET -k -H "Accept:application/json" -H "subjectid:MYTOKEN" https://services.toxbank.net/investigation/sparql/investigation_and_characteristics
curl -X GET -k -H "Accept:application/json" -H "subjectid:MYTOKEN" -d "value=http://purl.obolibrary.org/obo/NEWT_4932" https://services.toxbank.net/investigation/sparql/investigation_by_characteristic
curl -X GET -k -H "Accept:application/json" -H "subjectid:MYTOKEN" -d "value=organism" https://services.toxbank.net/investigation/sparql/investigation_by_characteristic_name
curl -X GET -k -H "Accept:application/json" -H "subjectid:MYTOKEN" -d "value=Saccharomyces cerevisiae (Baker's yeast)" https://services.toxbank.net/investigation/sparql/investigation_by_characteristic_value
curl -X GET -k -H "Accept:application/json" -H "subjectid:MYTOKEN" -d "values=http://purl.obolibrary.org/chebi/CHEBI:39867" https://services.toxbank.net/investigation/sparql/investigation_by_factor
curl -X GET -k -H "Accept:application/json" -H "subjectid:MYTOKEN" -d "factorValues=['http://purl.obolibrary.org/chebi/CHEBI:39867']" https://services.toxbank.net/investigation/sparql/investigation_by_factors
curl -X GET -k -H "Accept:application/json" -H "subjectid:MYTOKEN" -d "geneIdentifier=['entrez:3075']" https://services.toxbank.net/investigation/sparql/biosearch
curl -X GET -k -H 'Accept:application/json' -H 'subjectid:MYTOKEN' https://services.toxbank.net/investigation/sparql/investigations_and_factors
curl -X GET -k -H 'Accept:application/json' -H 'subjectid:MYTOKEN' https://services.toxbank.net/investigation/sparql/investigations_and_protocols
curl -X GET -k -H 'Accept:application/json' -H 'subjectid:MYTOKEN' -d "factorValues=['http://purl.obolibrary.org/chebi/CHEBI:39867']" https://services.toxbank.net/investigation/sparql/protocols_by_factors
Facts about API Investigation:SparqlRDF feed
Acts on | Investigation + |
Has output media type | application/json + |
Has status code | 200, 400, 401, 404 + |