<p style="margin-top: 0">
Not sure this is needed. May be as a high level container, which is
later translated into implementation specific to AA?
</p>
user
<p style="margin-top: 0">
A registered user
. Could be modified to use some other vocabulary
</p>
<p style="margin-top: 0">
An assay is an entity, containing a link to a protocol with a data
file,generated by the protocol
</p>
To represent an organization .
May be replaced by http://www.epimorphics.com/public/vocabulary/org.html
Link to the organization web site.
Organization
<p style="margin-top: 0">
A document,describing a Standard Operating Procedure/Protocol.
</p>
<p style="margin-top: 0">
We can consider using PublishingStatus Ontology
http://www.essepuntato.it/lode/http://purl.org/spar/pso
</p>
<p style="margin-top: 0">
or some of the document ontologies http://vocab.deri.ie/pdo
</p>
Protocol
<p style="margin-top: 0">
An experimental study. Must link to at least one protocol.
</p>
1
Study
Project
<p style="margin-top: 0">
To represent a project (may be replaced by DOAP entry)
http://trac.usefulinc.com/doap
</p>
<p style="margin-top: 0">
Could there be more than one template per protocol? I guess so...
</p>
<p style="margin-top: 0">
What is the meaning of a Protocol, assigned to a Project ?
</p>
<p style="margin-top: 0">
(better wording for the property is needed)
</p>
<p style="margin-top: 0">
Free text keywords.
</p>
<p style="margin-top: 0">
Links to the previous version of the protocol
</p>
<p style="margin-top: 0">
Links to the previous version of the study
</p>
<p style="margin-top: 0">
Links to the previous version of the entity
</p>
<p style="margin-top: 0">
A link from an Assay to the corresponding Study
</p>
<p style="margin-top: 0">
A link to a dataset. Perhaps can be defined as object property and
strongly typed.
</p>
<p style="margin-top: 0">
The date the document was submitted
</p>
<p style="margin-top: 0">
String,denoting the protocol version
</p>
<p style="margin-top: 0">
Defines if the protocol summary is searchable
</p>
<p style="margin-top: 0">
What are the allowed values ?
</p>
<p style="margin-top: 0">
A Study consists of Assays
</p>
false
2011-09-15T00:00:00
123
This is protocol abstract
true
2011-09-15
New abstract
abc
This is an abstract
http://abc.de/dataset/D123
true
1
cell
2
protein
This is another abstract
true
http://my.com/dataset/mydataset